From: Mural granulosa cell gene expression associated with oocyte developmental competence
Gene | Primer sequence | PCR product size (bp) | Location on rat chromosome | GenBank Access # | Fold changes (NDC/PDC) by | |
---|---|---|---|---|---|---|
 |  |  |  |  | gene array | RT-PCR |
Lysyl oxidase | RV:AGTCTCTGACA | 129 | 18q11 | NM_017061 | 2.8 | 2.86 |
(LOX) | TCCGCCCTA C | Â | Â | Â | Â | Â |
 | FW:ACCTGGTACCC |  |  |  |  |  |
 | GATCCCTA |  |  |  |  |  |
Glycoprotein-4- | FW:AGATAAAGATG | 186 | 5q22 | NM_053287 | -1.7 | -1.04 |
Beta-galactosyltrans | GGCGGCCGTTACT | Â | Â | Â | Â | Â |
ferase 2 (GGBT2; | RV:ACATGGTGTCT | Â | Â | Â | Â | Â |
UDP-Gal) | CCAGCCTGATTGA | Â | Â | Â | Â | Â |
Nerve growth factor | FW:AATGATGGGTT | 175 | Xq35 | NM_053401 | 1.6 | 1.03 |
receptor associated | GGGTGGAGATGGA | Â | Â | Â | Â | Â |
protein 1 (Ngfrap1; | RV:ACCGAAGTCAA | Â | Â | Â | Â | Â |
Bex3; Nade) | GGCATAAGGCAGA | Â | Â | Â | Â | Â |
Protein disulfide | FW:ATATGACCGAG | 185 | 11q22 | NM_001014125 | 1.8 | 1.86 |
isomerase- | CTGTGACGCTGAA | Â | Â | Â | Â | Â |
associated 5 (Pdia5) | RV:ACATCTTTGGC | Â | Â | Â | Â | Â |
 | TCCAGGGTCTTCT |  |  |  |  |  |
Protein disulfide | FW:ACCTTCTTTCT | 182 | Chromo- | NM_001004442 | 1.8 | 1.04 |
isomerase- | AGCGGTCAGTGCT | Â | some 6 | Â | Â | Â |
associated 6 (Pdia6) | RV:AGTGCACTTGC | Â | Â | Â | Â | Â |
 | TGCTTTCTTCCAC |  |  |  |  |  |
Myeloid ecotropic | FW:TAGCCACCAAT | 99 | 14q22 | XM_223643 | 1.6 | 1.33 |
viral integration site 1 | ATCATGAGGGCGT | Â | Â | Â | Â | Â |
homolog (Meis1) | RV:TGAGTCCCGTA | Â | Â | Â | Â | Â |
 | TCTTGTGCCAACT |  |  |  |  |  |
CD83 antigen | FW:ATGTGCCTGAA | 193 | 17p12 | NM_001108410 | 1.7 | 1.6 |
 | TACCACCTGGACA |  |  |  |  |  |
 | RV:AGCCGCATGAA |  |  |  |  |  |
 | ACATGAAGCTGAC |  |  |  |  |  |
Lysozyme (Lyz) | FW:TATGAACGCTG | 95 | 7q22 | NM_012771 | 1.7 | 1.37 |
 | TGAGTTCGCCAGA |  |  |  |  |  |
 | RV:TGCTGAGCTAA |  |  |  |  |  |
 | ACACACCCAGTCT |  |  |  |  |  |
Trinucleotide repeat | FW:TGAAGTACCTC | 176 | 1q36 | NM_001107549 | 1.7 | 1.03 |
containing 6 (Tnrc6) | CACGATTTCGCCA | Â | Â | Â | Â | Â |
 | RV:TGCTGTTCTGC |  |  |  |  |  |
 | ACCTCTCCGTTAT |  |  |  |  |  |
Interleukin 13 | FW:AAGTGAGAAGC | 155 | Xq12 | NM_145789 | 1.4 | 1.16 |
receptor alpha 1 | CTAGCCCTTTGGT | Â | Â | Â | Â | Â |
(Il13ra1) | RV:AGTTGGTGTCC | Â | Â | Â | Â | Â |
 | GGGCTTGTATTCT |  |  |  |  |  |
18S rRNA | FW:CGCGGTTCTAT | 219 | Chromo- | M11188 | Housekeeping | Â |
 | TTTGTTGGT |  | some 3 |  |  |  |
 | RV:AGTCGGCATCG |  |  |  |  |  |
 | TTTATGGTC |  |  |  |  |  |