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Table 1 Differences in the expressions of genes (normalized and log2-transformed intensities) related to pluripotency, embryonic stem cells and embryogenesis in FACS-isolated small putative ovarian stem cells (OSCs) in comparison with fibroblasts (FBs) revealed using the Student’s T test

From: Small SSEA-4-positive cells from human ovarian cell cultures: related to embryonic stem cells and germinal lineage?

 

Log fold change

p-value

Adj. p-value

POU5F1

0.78

0.122520121

1.64E-01

SALL4 **

5.41

0.000714457

2.23E-03

CDH1 **

3.21

0.018838123

3.21E-02

LIN28B **

5.11

0.005075958

1.06E-02

NANOG

0.86

0.552979106

6.08E-01

SOX2

−2.15

0.023394118

3.87E-02

SOX11 **

2.90

0.000290721

1.18E-03

DPPA3

−2.19

0.048897088

7.36E-02

LEFTY1 **

4.23

0.000384105

1.42E-03

ZIC3 **

3.79

9.29E-05

5.66E-04

ZIC5

−0.63

0.090116973

1.25E-01

PRDM14 **

3.63

0.003039563

6.94E-03

GAL

1.58

0.26269284

3.19E-01

PPP1R9A **

1.55

0.006663692

1.33E-02

SMO

−0.68

0.545353659

6.01E-01

MMP25 *

−2.43

0.006783372

1.35E-02

MLLT4

−1.10

0.211498682

2.64E-01

BMP7

0.73

0.515756119

5.73E-01

MYBL2 **

2.35

0.006965786

1.38E-02

DNMT3B **

2.64

0.000957838

2.79E-03

ZFP42

1.05

0.148285014

1.94E-01

HESRG **

6.89

0.000200358

9.14E-04

ZSCAN10

1.37

0.130067706

1.73E-01

TRO

−1.13

0.456996609

5.17E-01

DDX11

−2.57

0.015893686

2.78E-02

  1. P-values were adjusted for the effect of multiple testing according to Benjamini-Hochberg (limma, Bioconductor, programme R 2.14.1). Statistical significance was set at p < 0.05. Legend: ** – genes up-regulated in OSCs, * – genes down-regulated in OSCs.