Table 2 Reference genes, target genes and assays used
Gene symbol | Gene name(synonyms) | Function | NCBI Gene reference | Assay ID |
|---|---|---|---|---|
ABL1 | C-abl oncogene 1, non-receptor tyrosine kinase | Cell differentiation, division, adhesion and stress response. | NM_005157.3, NM_007313.2 | Hs00245445_m1 |
ACTB | Actin, beta | Cell motility, structure, integrity | NM_001101.3 | Hs99999903_m1 |
CDKN1A | Cyclin-dependent kinase inhibitor 1A (p21, Cip1) | Regulation of cell cycle progression at G1. | NM_004064.3 | Hs00355782_m1 |
GADPH | Glyceraldehyde-3-phosphate dehydrogenase | Catalysation of an important energy-yielding step in carbohydrate metabolism. | NM_002046.3 | Hs99999905_m1 |
GUSB | Glucuronidase, beta | Degradation of glycosaminoglycans | NM_000181.2 | Hs99999908_m1 |
HPRT1 | Hypoxanthine phosphoribosyl transferase 1 | Generation of purine nucleotides through the purine salvage pathway. | NM_000194.2 | Hs99999909_m1 |
HSP90AB1 | Heat shock protein 90 | Protein folding, response to stress. | NM_007355 | Hs.PT.49a.20846338 |
IPO8 | Importin 8 | Nuclear transport. | NM_001190995.1 NM_006390.3 | Hs00183533_m1 |
PPIA | Peptidylprolyl isomerase A (cyclophilin A) | Protein folding, ligand for Cyclosporin A. | NM_021130.3 | Hs99999904_m1 Hs.PT.39a.22214851 |
RPL30 | Ribosomal protein L30 | Component of 60S subunit. Catalysation of protein synthesis. | NM_000989.2 | Hs00265497_m1 |
RPL4 | Ribosomal protein L4 | Component of 60S subunit. | NM_000968 | Hs.PT.49a.20266660 |
RPLPO | Ribosomal protein, large, PO | Component of 60S subunit. | NM_053275.3, NM_001002.3 | Hs99999902_m1 |
TBP | TATA box binding protein | Initiation of transcription of RNA polymerases. | M34960.1 M55654.1 | Hs99999910_m1 |
GPER | G protein-coupled estrogen receptor | Rapid estrogen signalling. | NM_001505.2 | Hs00173506_m1 |
uPAR | Urokinase plasminogen activator receptor | Cell invasion, migration, signalling via ERK1/2. | NM_001005376.2 NM_001005377.2 NM_002659.3 | Hs00182181_m1 |