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Table 1 Gene ontology annotated from over-expressed genes in spheroid cells compared with parental cells

From: Integrative analysis of transcription factors and microRNAs in ovarian cancer cell spheroids

Term

Count

%

P-Value

Bonferroni

GO:0006351~transcription, DNA-templated

96

18.3

2.99E-11

5.28E-08

GO:0006355~regulation of transcription, DNA-templated

73

13.9

2.40E-08

4.23E-05

GO:0000122~negative regulation of transcription from RNA polymerase II promoter

34

6.4

4.40E-04

0.540151

GO:0045893~positive regulation of transcription, DNA-templated

26

4.9

9.82E-04

0.82318

GO:0006366~transcription from RNA polymerase II promoter

25

4.7

0.001996

0.970526

GO:0010467~gene expression

6

1.1

0.006248

0.999984

GO:0051726~regulation of cell cycle

9

1.7

0.011435

1

GO:0036498~IRE1-mediated unfolded protein response

6

1.1

0.014689

1

GO:0051569~regulation of histone H3-K4 methylation

3

0.5

0.019287

1

GO:0033762~response to glucagon

3

0.5

0.023722

1