Skip to main content

Table 3 Potential oocyte maturation biomarkers

From: Transcriptomics of cumulus cells – a window into oocyte maturation in humans

Gene ID

Description

Previous Study

Method of Detection

Fold Change in this study

ADAMTS1

ADAM Metallopeptidase with Thrombospondin Type 1 Motif 1

Devjak et al. 2012 [19]

RNAseq

2.27

Yerushalmi et al. 2014 [20]

RNAseq

ANK2

Ankyrin 2

Devjak et al. 2012 [19]

RNAseq

− 3.13

ANKRD57

aka. SOWAHC, Sosondowah Ankyrin Repeat Domain Family Member C

Ouandaogo et al. 2011 [21]

Microarray

−2.21

AOC2

Amine Oxidase, Copper Containing 2

Ouandaogo et al. 2011 [21]

Microarray

3.72

AREG

Amphiregulin

Feuerstein et al. 2007 [22]

RT-qPCR

5.4

BDNF

Brain Derived Neurotrophic Factor

Anderson et al. 2009 [23]

RT-qPCR

2.68

BMP2

Bone Morphogenetic Protein 2

Devjak et al. 2012 [19]

RNAseq

2.46

BUB1

BUB1 Mitotic Checkpoint Serine/Threonine Kinase

Devjak et al. 2012 [19]

RNAseq

−4.28

Feuerstein et al. 2012 [24]

Microarray

C10orf10

aka. DEPP1, Autophagy Regulator

Devjak et al. 2012 [19]

RNAseq

2.99

CCDC99

aka. SPDL1, Spindle Apparatus Coiled-Coil Protein 1

Devjak et al. 2012 [19]

RNAseq

− 3.46

CDH3

Cadherin 3

Devjak et al. 2012 [19]

RNAseq

−14.26

COX2

aka. PTGS2, Prostaglandin-Endoperoxide Synthase 2

Feuerstein et al. 2007 [22]

RT-qPCR

4.00

Anderson et al. 2009 [23]

RT-qPCR

Wathlet et al. 2011 [25]

RT-qPCR

Yerushalmi et al. 2014 [20]

RNAseq

CRHBP

Corticotropin Releasing Hormone Binding Protein

Devjak et al. 2012 [19]

RNAseq

−5.41

DHCR24

24-Dehydrocholesterol Reductase

Yerushalmi et al. 2014 [20]

RNAseq

2.29

DSE

Dermatan Sulfate Epimerase

Devjak et al. 2012 [19]

RNAseq

−2.36

F2RL1

F2R Like Trypsin Receptor 1

Ouandaogo et al. 2011 [21]

Microarray

−3.06

FSHR

Follicle Stimulating Hormone Receptor

Yerushalmi et al. 2014 [20]

RNAseq

−8.13

GABRA5

Gamma-Aminobutyric Acid Type A Receptor Alpha5 Subunit

Devjak et al. 2012 [19]

RNAseq

− 3.93

GLRA2

Glycine Receptor Alpha 2

Devjak et al. 2012 [19]

RNAseq

−28.47

GPX

Glutathione Peroxidase 3

Yerushalmi et al. 2014 [20]

RNAseq

−3.56

GREM1

Gremlin 1, DAN Family BMP Antagonist

Anderson et al. 2009 [23]

RT-qPCR

−2.03

Yerushalmi et al. 2014 [20]

RNAseq

HSD11B1

Hydroxysteroid 11-Beta Dehydrogenase 1

Devjak et al. 2012 [19]

RNAseq

2.95

ID2

Inhibitor of DNA Binding 2

Ouandaogo et al. 2011 [21]

Microarray

3.53

ID3

Inhibitor of DNA Binding 3

Devjak et al. 2012 [19]

RNAseq

− 4.9

ITGB3

Integrin Subunit Beta 3

Devjak et al. 2012 [19]

RNAseq

− 4.05

ITPKA

Inositol-Trisphosphate 3-Kinase A

Wathlet et al. 2011 [25]

RT-qPCR

2.49

LHCGR

Luteinizing Hormone/Choriogonadotropin Receptor

Yerushalmi et al. 2014 [20]

RNAseq

3.72

MAOB

Monoamine Oxidase B

Devjak et al. 2012 [19]

RNAseq

− 2.38

MGP

Matrix Gla Protein

Devjak et al. 2012 [19]

RNAseq

− 8.01

NDP

Norrin Cystine Knot Growth Factor

Devjak et al. 2012 [19]

RNAseq

− 2.4

NID2

Nidogen 2

Devjak et al. 2012 [19]

RNAseq

5.46

NKAIN1

Sodium/Potassium Transporting ATPase Interacting 1

Devjak et al. 2012 [19]

RNAseq

4.38

NOS2

Nitric Oxide Synthase 2

Yerushalmi et al. 2014 [20]

RNAseq

−2.48

PALLD

Palladin, Cytoskeletal Associated Protein

Devjak et al. 2012 [19]

RNAseq

−4.13

PTX3

Pentraxin 3

Zhang et al. 2005 [26]

Microarray

3.08

Anderson et al. 2009 [23]

RT-qPCR

SERPINE2

Serpin Family E Member 2

Feuerstein et al. 2012 [24]

Microarray

− 4.31

Yerushalmi et al. 2014 [20]

RNAseq

SFRP4

Secreted Frizzled Related Protein 4

Devjak et al. 2012 [19]

RNAseq

− 20.39

Feuerstein et al. 2012 [24]

Microarray

Yerushalmi et al. 2014 [20]

RNAseq

SPOCK2

SPARC (Osteonectin), Cwcv And Kazal Like Domains Proteoglycan 2

Devjak et al. 2012 [19]

RNAseq

2.88

Feuerstein et al. 2012 [24]

Microarray

STAR

Steroidogenic Acute Regulatory Protein

Feuerstein et al. 2007 [22]

RT-qPCR

2.67

Yerushalmi et al. 2014 [20]

RNAseq

TLL2

Tolloid Like 2

Yerushalmi et al. 2014 [20]

RNAseq

−3.17

TNFSF4

TNF Superfamily Member 4

Devjak et al. 2012 [19]

RNAseq

−4.01

TSPAN7

Tetraspanin 7

Devjak et al. 2012 [19]

RNAseq

−3.3