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Table 2 Overview of the rare GPR3 variants identified in POI patients

From: Rare variants in GPR3 in POI patients: a case series with review of literature

Subject

cDNA changea

Protein change

Minor allele frequencyb

Functional predictionc

ExAC

gnomAD

PGG.Han

SIFT

MutationTaster

CADD

DANN

F057

c.G772A

p.A258T

0.0001

0.0002

0

Deleterious

Disease causing

2.61

0.987

F086

c.C973T

p.R325C

0.0001

0.0002

0

Deleterious

Disease causing

5.121

0.999

  1. aThe GenBank accession number of GPR3 is NM_005281
  2. bMinor allele frequencies were estimated according to the ExAC (East Asian), gnomAD (East Asian) and PGG.Han databases
  3. cMutation assessment using the SIFT, MutationTaster, CADD and DANN tools. Higher CADD and DANN values indicate that mutations are more likely to have deleterious effects. The CADD threshold is usually set at 4 and 0.93 is used for the DANN cutoff