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Table 1 Polycystic Ovarian Syndrome (PCOS) MTNR1A- and MTNR1B-Risk Single Nucleotide Polymorphisms (SNPs)

From: The melatonin receptor genes are linked and associated with the risk of polycystic ovary syndrome

Gene

Model1

SNP

Position

Ref

Alt

Risk Allele

Consequence

LD block

Reported in PCOS or related phenotype?2

MTNR1A

D1, D2, R1, R2

rs6820205

186,543,713

T

C

C

Intronic

Independent

Novel

D1, D2, R1, R2

rs2119883

186,547,921

C

T

T

Intronic

Set01

T2D3 [13]

D1

rs4862706

186,552,540

G

A

A

Intronic

Independent

Novel

D1, D2

rs13147179

186,554,365

G

A

A

Intronic

Set01

T2D3 [13]

MTNR1B

D1, R1

rs4601728

92,971,992

A

G

G

Intronic

Independent

T2D-MDD4 [14]

D1, D2, R1

rs61747139

92,981,951

A

G

G

Missense

Independent

T2D3 [14]

  1. 1Models: D1: dominant, complete penetrance, D2: dominant, incomplete penetrance, R1: recessive, complete penetrance, R2: recessive, incomplete penetrance. 2(i.e., type 2 diabetes, obesity, insulin resistance, metabolic syndrome, hyperglycemia, oligoamenorrhea, anovulation, irregular menses, hyperandrogenism, male-pattern baldness, acne, hirsutism, infertility). 3T2D=type 2 diabetes, 4MDD=major depressive disorder)