Gene | Frequency | Type of alteration | Original function/Pathway affected | Reference |
---|---|---|---|---|
ARID1A | 40–57% | Mutation copy number loss | SWI-SNF chromatin remodeling complex DNA double-strand break (DSB) repair | |
SMARCA4 | 5–18% | Mutation | ||
ARID1B | 6–18% | Mutation | ||
PI3KCA |  > 50% | Mutation | PI3K-AKT pathway | |
PTEN | 5–8.3% | Loss-of-function mutation | ||
AKT2 | 8–26% | Amplification | ||
ZNF217 | 20–36% | Amplification | ||
KRAS | 9–20% | Mutation | MAPK pathway | |
PPP2R1A | 7–15% | Mutation | ||
ERBB2 | 2–13% | Mutation and amplification | ||
MET | 24–37% | Amplification | ||
TP53 | 8.5–21.6% | Mutation | DNA repair | |
BRCA1/2 | 2.1–6% | Mutaion | ||
HNF-1β |  > 90% | Hypo-methylation overexpression | Glucose metabolism |