Establishment and characterization of a cell line (HCH-1) originating from a human clear cell carcinoma of the ovary

Table 2 Variants outside of hotspot locations of 50 cancer genes

	Chromosome	Position	Ref Allele	Variant	Allele Type	Frequency	Variant Type	Allele Source^a	Gene Symbol	Coverage	AA Ref	AA Variant
1	chr3	178917005	A	G	Heterozygous	40.2	SNP	Novel	PIK3CA	1950	unknown	unknown
2	chr4	1807894	G	A	Homozygous	100	SNP	Novel	FGFR3	1222	T	T
3	chr4	55141055	A	G	Homozygous	100	SNP	Novel	PDGFRA	1755	I	I
4	chr4	55972974	T	A	Homozygous	100	SNP	Novel	KDR	1987	Q	H
5	chr4	153249443	C	T	Homozygous	100	SNP	Novel	FBXW7	1998	V	V
6	chr5	112175770	G	A	Homozygous	100	SNP	Novel	APC	1981	A	A
7	chr5	149433596	TG	GA	Heterozygous	32.1	MNP	Novel	CSF1R	1993	unknown	unknown
8	chr7	55249063	G	A	Heterozygous	52.1	SNP	Novel	EGFR	1999	Q	Q
9	chr13	28610183	A	G	Homozygous	100	SNP	Novel	FLT3	1999	unknown	unknown
10	chr17	7579472	G	C	Heterozygous	49.2	SNP	Novel	TP53	1976	P	R
11	chr19	1220321	T	C	Heterozygous	55.4	SNP	Novel	STK11	1894	unknown	unknown
12	chr20	57484611	G	A	Heterozygous	48.9	SNP	Novel	GNAS	1994	R	H

ISSN: 1757-2215